MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,736
rRNA: 15
tRNA: 60
tmRNA: 1
Total number of protein coding genes annotated/found:
2,715
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5041|JADGLJ010000001.1
MBF0812098.1
Genome Viewer
NA
AA
537/179
23295-22759
alkaline shock response membrane anchor protein AmaP
SEQF5041|JADGLJ010000001.1
MBF0812099.1
Genome Viewer
NA
AA
1584/528
25013-23430
BCCT family transporter
SEQF5041|JADGLJ010000001.1
MBF0812100.1
Genome Viewer
NA
AA
1008/336
26235-25228
zinc-binding alcohol dehydrogenase family protein
SEQF5041|JADGLJ010000001.1
MBF0812101.1
Genome Viewer
NA
AA
1008/336
27263-26256
NADP-dependent oxidoreductase
SEQF5041|JADGLJ010000001.1
MBF0812102.1
Genome Viewer
NA
AA
1008/336
27413-28420
LLM class flavin-dependent oxidoreductase
SEQF5041|JADGLJ010000001.1
MBF0812103.1
Genome Viewer
NA
AA
867/289
29408-28542
alpha/beta hydrolase
SEQF5041|JADGLJ010000001.1
MBF0812104.1
Genome Viewer
NA
AA
399/133
30025-29627
30S ribosomal protein S9
SEQF5041|JADGLJ010000001.1
MBF0812105.1
Genome Viewer
NA
AA
438/146
30476-30039
50S ribosomal protein L13
SEQF5041|JADGLJ010000001.1
MBF0812106.1
Genome Viewer
NA
AA
795/265
31486-30692
tRNA pseudouridine(38-40) synthase TruA
SEQF5041|JADGLJ010000001.1
MBF0812107.1
Genome Viewer
NA
AA
807/269
32299-31493
energy-coupling factor transporter transmembrane protein EcfT
SEQF5041|JADGLJ010000001.1
MBF0812108.1
Genome Viewer
NA
AA
864/288
33152-32289
energy-coupling factor transporter ATPase
SEQF5041|JADGLJ010000001.1
MBF0812109.1
Genome Viewer
NA
AA
810/270
33958-33149
energy-coupling factor transporter ATPase
SEQF5041|JADGLJ010000001.1
MBF0812110.1
Genome Viewer
NA
AA
369/123
35017-34649
50S ribosomal protein L17
SEQF5041|JADGLJ010000001.1
MBF0812111.1
Genome Viewer
NA
AA
945/315
35980-35036
DNA-directed RNA polymerase subunit alpha
SEQF5041|JADGLJ010000001.1
MBF0812112.1
Genome Viewer
NA
AA
390/130
36445-36056
30S ribosomal protein S11
SEQF5041|JADGLJ010000001.1
MBF0812113.1
Genome Viewer
NA
AA
366/122
36834-36469
30S ribosomal protein S13
SEQF5041|JADGLJ010000001.1
MBF0812114.1
Genome Viewer
NA
AA
114/38
36969-36856
50S ribosomal protein L36
SEQF5041|JADGLJ010000001.1
MBF0812115.1
Genome Viewer
NA
AA
219/73
37219-37001
translation initiation factor IF-1
SEQF5041|JADGLJ010000001.1
MBF0812116.1
Genome Viewer
NA
AA
651/217
38043-37393
adenylate kinase
SEQF5041|JADGLJ010000001.1
MBF0812117.1
Genome Viewer
NA
AA
1293/431
39353-38061
preprotein translocase subunit SecY
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Items 21 - 40
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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